DC Field | Value | Language |
---|---|---|
dc.contributor.author | Kim, JK | - |
dc.contributor.author | Bang, SY | - |
dc.contributor.author | Choi, SJ | - |
dc.date.accessioned | 2016-04-01T01:49:05Z | - |
dc.date.available | 2016-04-01T01:49:05Z | - |
dc.date.created | 2009-02-28 | - |
dc.date.issued | 2006-12 | - |
dc.identifier.issn | 0031-3203 | - |
dc.identifier.other | 2006-OAK-0000006306 | - |
dc.identifier.uri | https://oasis.postech.ac.kr/handle/2014.oak/23769 | - |
dc.description.abstract | Prediction of the cellular location of a protein plays an important role in inferring the function of the protein. Feature extraction is a critical part in prediction systems, requiring raw sequence data to be transformed into appropriate numerical feature vectors while minimizing information loss. In this paper, we present a method for extracting useful features from protein sequence data. The method employs local and global pairwise sequence alignment scores as well as composition-based features. Five different features are used for training support vector machines (SVMs) separately and a weighted majority voting makes a final decision. The overall prediction accuracy evaluated by the 5-fold cross-validation reached 88.53% for the eukaryotic animal data set. Comparing the prediction accuracy of various feature extraction methods, provides a biological insight into the location of targeting information. Our experimental results confirm that our feature extraction methods are very useful for predicting subcellular localization of proteins. (c) 2006 Pattern Recognition Society. Published by Elsevier Ltd. All rights reserved. | - |
dc.description.statementofresponsibility | X | - |
dc.language | English | - |
dc.publisher | PERGAMON-ELSEVIER SCIENCE LTD | - |
dc.relation.isPartOf | PATTERN RECOGNITION | - |
dc.title | Sequence-driven features for prediction of subcellular localization of proteins | - |
dc.type | Article | - |
dc.contributor.college | 컴퓨터공학과 | - |
dc.identifier.doi | 10.1016/j.patcog.2006.02.021 | - |
dc.author.google | Kim, JK | - |
dc.author.google | Bang, SY | - |
dc.author.google | Choi, SJ | - |
dc.relation.volume | 39 | - |
dc.relation.issue | 12 | - |
dc.relation.startpage | 2301 | - |
dc.relation.lastpage | 2311 | - |
dc.contributor.id | 10077620 | - |
dc.relation.journal | PATTERN RECOGNITION | - |
dc.relation.index | SCI급, SCOPUS 등재논문 | - |
dc.relation.sci | SCI | - |
dc.collections.name | Journal Papers | - |
dc.type.rims | ART | - |
dc.identifier.bibliographicCitation | PATTERN RECOGNITION, v.39, no.12, pp.2301 - 2311 | - |
dc.identifier.wosid | 000241318400005 | - |
dc.date.tcdate | 2019-01-01 | - |
dc.citation.endPage | 2311 | - |
dc.citation.number | 12 | - |
dc.citation.startPage | 2301 | - |
dc.citation.title | PATTERN RECOGNITION | - |
dc.citation.volume | 39 | - |
dc.contributor.affiliatedAuthor | Kim, JK | - |
dc.contributor.affiliatedAuthor | Choi, SJ | - |
dc.identifier.scopusid | 2-s2.0-33748420316 | - |
dc.description.journalClass | 1 | - |
dc.description.journalClass | 1 | - |
dc.description.wostc | 8 | - |
dc.description.isOpenAccess | N | - |
dc.type.docType | Article | - |
dc.subject.keywordAuthor | protein sequence feature extraction | - |
dc.subject.keywordAuthor | subcellular localization prediction | - |
dc.subject.keywordAuthor | support vector machine | - |
dc.relation.journalWebOfScienceCategory | Computer Science, Artificial Intelligence | - |
dc.relation.journalWebOfScienceCategory | Engineering, Electrical & Electronic | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.relation.journalResearchArea | Computer Science | - |
dc.relation.journalResearchArea | Engineering | - |
Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.
library@postech.ac.kr Tel: 054-279-2548
Copyrights © by 2017 Pohang University of Science ad Technology All right reserved.